LipidomeDB data calculation environment: Online processing of direct-infusion mass spectral data for lipid profiles

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dc.contributor.author Zhou, Zhenguo
dc.contributor.author Marepally, Shantan Reddy
dc.contributor.author Nune, Daya Sagar
dc.contributor.author Pallakollu, Prashanth
dc.contributor.author Ragan, Gail
dc.contributor.author Roth, Mary R.
dc.contributor.author Wang, Liangjiang
dc.contributor.author Lushington, Gerald H.
dc.contributor.author Visvanathan, Mahesh
dc.contributor.author Welti, Ruth
dc.date.accessioned 2011-10-10T19:16:26Z
dc.date.available 2011-10-10T19:16:26Z
dc.date.issued 2011-10-10
dc.identifier.uri http://hdl.handle.net/2097/12214
dc.description.abstract LipidomeDB Data Calculation Environment (DCE) is a web application to quantify complex lipids by processing data acquired after direct infusion of a lipid-containing biological extract, to which a cocktail of internal standards has been added, into an electrospray source of a triple quadrupole mass spectrometer. LipidomeDB DCE is located on the public Internet at http://lipidome.bcf.ku.edu:9000/Lipidomics. LipidomeDB DCE supports targeted analyses; analyte information can be entered, or pre-formulated lists of typical plant or animal polar lipid analytes can be selected. LipidomeDB DCE performs isotopic deconvolution and quantification in comparison to internal standard spectral peaks. Multiple precursor or neutral loss spectra from up to 35 samples may be processed simultaneously with data input as Excel files and output as tables viewable on the web and exportable in Excel. The pre-formulated compound lists and web access, used with direct-infusion mass spectrometry, provide a simple approach to lipidomic analysis, particularly for new users. en_US
dc.relation.uri http://www.springerlink.com/content/n14965nkg551642n/ en_US
dc.rights The final publication is available at www.springerlink.com en_US
dc.subject Triple quadrupole mass spectrometry en_US
dc.subject Precursor scan en_US
dc.subject Neutral loss scan en_US
dc.subject Direct infusion en_US
dc.subject Lipid quantification en_US
dc.subject Lipidomics en_US
dc.title LipidomeDB data calculation environment: Online processing of direct-infusion mass spectral data for lipid profiles en_US
dc.type Article (author version) en_US
dc.date.published 2011 en_US
dc.citation.doi doi: 10.1007/s11745-011-3575-8 en_US
dc.citation.epage 884 en_US
dc.citation.issue 9 en_US
dc.citation.spage 879 en_US
dc.citation.volume 46 en_US
dc.citation.btitle Lipids en_US
dc.contributor.authoreid welti en_US
dc.contributor.authoreid mrroth en_US
dc.contributor.authoreid gragan en_US

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