Browsing Plant Pathology Faculty Research and Publications by Title

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Browsing Plant Pathology Faculty Research and Publications by Title

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  • Beed, Fen; Benedetti, Anna; Cardinali, Gianluigi; Chakraborty, Sukumar; Dubois, Thomas; Halewood, Michael; Garrett, Karen A. (FAO Commission on Genetic Resources for Food and Agriculture, 2011-12-16)
  • Dendy, S.P.; Frank, E.E.; Rouse, M.N.; Travers, S.E.; Garrett, Karen A. (2010-01-11)
    Research in the effects of climate change on plant disease continues to be limited, but some striking progress has been made. At the genomic level, advances in technologies for the high-throughput analysis of gene ...
  • Cernadas, Raul A.; Doyle, Erin L.; Niño-Liu, David O.; Wilkins, Katherine E.; Bancroft, Timothy; Wang, Li; Schmidt, Clarice L.; Caldo, Rico; Yang, Bing; White, Frank F.; Nettleton, Dan; Wise, Roger P.; Bogdanove, Adam J. (2014-05-09)
    Bacterial leaf streak of rice, caused by Xanthomonas oryzae pv. oryzicola (Xoc) is an increasingly important yield constraint in this staple crop. A mesophyll colonizer, Xoc differs from X. oryzae pv. oryzae (Xoo), which ...
  • Akhunov, Eduard D.; Sehgal, Sunish K.; Liang, Hanquan; Wang, Shichen; Akhunova, Alina R.; Kaur, Gaganpreet; Li, Wanlong; Forrest, Kerrie L.; See, Deven; Šimková, Hana; Ma, Yaqin; Hayden, Matthew J.; Luo, Mingcheng; Faris, Justin D.; Dolezel, Jaroslav; Gill, Bikram S. (2013-02-18)
    Cycles of whole-genome duplication (WGD) and diploidization are hallmarks of eukaryotic genome evolution and speciation. Polyploid wheat (Triticum aestivum) has had a massive increase in genome size largely due to recent ...
  • Jalan, Neha; Kumar, Dibyendu; Andrade, Maxuel O.; Yu, Fahong; Jones, Jeffrey B.; Graham, James H.; White, Frank F.; Setubal, João C.; Wang, Nian (2013-10-03)
    Background: Citrus bacterial canker is a disease that has severe economic impact on citrus industries worldwide and is caused by a few species and pathotypes of Xanthomonas. X. citri subsp. citri strain 306 (XccA306) is ...
  • de Vries, R. P.; Riley, R.; Wiebenga, A.; Aguilar-Osorio, G.; Amillis, S.; Uchima, C. A.; Anderluh, G.; Asadollahi, M.; Askin, M.; Barry, K.; Battaglia, E.; Bayram, O.; Benocci, T.; Braus-Stromeyer, S. A.; Caldana, C.; Canovas, D.; Cerqueira, G. C.; Chen, F. S.; Chen, W. P.; Choi, C.; Clum, A.; dos Santos, R. A. C.; Damasio, A. R. D.; Diallinas, G.; Emri, T.; Fekete, E.; Flipphi, M.; Freyberg, S.; Gallo, A.; Gournas, C.; Habgood, R.; Hainaut, M.; Harispe, M. L.; Henrissat, B.; Hilden, K. S.; Hope, R.; Hossain, A.; Karabika, E.; Karaffa, L.; Karanyi, Z.; Krasevec, N.; Kuo, A.; Kusch, H.; LaButti, K.; Lagendijk, E. L.; Lapidus, A.; Levasseur, A.; Lindquist, E.; Lipzen, A.; Logrieco, A. F.; MacCabe, A.; Makela, M. R.; Malavazi, I.; Melin, P.; Meyer, V.; Mielnichuk, N.; Miskei, M.; Molnar, A. P.; Mule, G.; Ngan, C. Y.; Orejas, M.; Orosz, E.; Ouedraogo, J. P.; Overkamp, K. M.; Park, H. S.; Perrone, G.; Piumi, F.; Punt, P. J.; Ram, A. F. J.; Ramon, A.; Rauscher, S.; Record, E.; Riano-Pachon, D. M.; Robert, V.; Rohrig, J.; Ruller, R.; Salamov, A.; Salih, N. S.; Samson, R. A.; Sandor, E.; Sanguinetti, M.; Schutze, T.; Sepcic, K.; Shelest, E.; Sherlock, G.; Sophianopoulou, V.; Squina, F.; Sun, H.; Susca, A.; Todd, Richard B.; Tsang, A.; Unkles, S. E.; van de Wiele, N.; van Rossen-Uffink, D.; Oliveira, J. V. D.; Vesth, T. C.; Visser, J.; Yu, J. H.; Zhou, M. M.; Andersen, M. R.; Archer, D. B.; Baker, S. E.; Benoit, I.; Brakhage, A. A.; Braus, G. H.; Fischer, R.; Frisvad, J. C.; Goldman, G. H.; Houbraken, J.; Oakley, B.; Pocsi, I.; Scazzocchio, C.; Seiboth, B.; vanKuyk, P. A.; Wortman, J.; Dyer, P. S.; Grigoriev, I. V.
    Background: The fungal genus Aspergillus is of critical importance to humankind. Species include those with industrial applications, important pathogens of humans, animals and crops, a source of potent carcinogenic ...
  • Huguet-Tapia, J. C.; Peng, Zhou; Yang, B.; Yin, Z.; Liu, Sanzhen; White, F. F.
    Xanthomonas oryzae pv. oryzae is the etiological agent of bacterial rice blight. Three distinct clades of X. oryzae pv. oryzae are known. We present the complete annotated genome of the African clade strain AXO194 using ...
  • Margosian, Margaret L.; Garrett, Karen A.; Hutchinson, J. M. Shawn; With, Kimberly A.
    More than two-thirds of cropland in the United States is devoted to the production of just four crop species—maize, wheat, soybeans, and cotton— raising concerns that homogenization of the American agricultural landscape ...
  • Fellers, John P.; Soltani, Bahram M.; Bruce, Myron; Linning, Rob; Cuomo, Christina A.; Szabo, Les J.; Bakkeren, Guus (2013-04-16)
    Background: Wheat leaf rust (Puccinia triticina Eriks; Pt) and stem rust fungi (P. graminis f.sp. tritici; Pgt) are significant economic pathogens having similar host ranges and life cycles, but different alternate hosts. ...
  • Beier, S.; Himmelbach, A.; Colmsee, C.; Zhang, X. Q.; Barrero, R. A.; Zhang, Q. S.; Li, L.; Bayer, M.; Bolser, D.; Taudien, S.; Groth, M.; Felder, M.; Hastie, A.; Simkova, H.; Stankova, H.; Vrana, J.; Chan, S. K.; Munoz-Amatriain, M.; Ounit, R.; Wanamaker, S.; Schmutzer, T.; Aliyeva-Schnorr, L.; Grasso, S.; Tanskanen, J.; Sampath, D.; Heavens, D.; Cao, S. J.; Chapman, B.; Dai, F.; Han, Y.; Li, H.; Li, X.; Lin, C. Y.; McCooke, J. K.; Tan, C.; Wang, S. B.; Yin, S. Y.; Zhou, G. F.; Poland, Jesse A.; Bellgard, M. I.; Houben, A.; Dolezel, J.; Ayling, S.; Lonardi, S.; Langridge, P.; Muehlbauer, G. J.; Kersey, P.; Clark, M. D.; Caccamo, M.; Schulman, A. H.; Platzer, M.; Close, T. J.; Hansson, M.; Zhang, G. P.; Braumann, I.; Li, C. D.; Waugh, R.; Scholz, U.; Stein, N.; Mascher, M.
    Barley (Hordeum vulgare L.) is a cereal grass mainly used as animal fodder and raw material for the malting industry. The map-based reference genome sequence of barley cv. `Morex' was constructed by the International Barley ...
  • Sikora, E. J.; Allen, T. W.; Wise, K. A.; Bergstrom, G.; Bradley, C. A.; Bond, J.; Brown-Rytlewski, D.; Chilvers, M.; Damicone, J.; DeWolf, Erick; Dorrance, A.; Dufault, N.; Esker, P.; Faske, T. R.; Giesler, L.; Goldberg, N.; Golod, J.; Gómez, I. R. G.; Grau, C.; Grybauskas, A.; Franc, G.; Hammerschmidt, R.; Hartman, G. L.; Henn, R. A.; Hershman, D.; Hollier, C.; Isakeit, T.; Isard, S.; Jacobsen, B.; Jardine, Douglas J.; Kemerait, R.; Koenning, S.; Langham, M.; Malvick, D.; Markell, S.; Marois, J. J.; Monfort, S.; Mueller, D.; Mueller, J.; Mulrooney, R.; Newman, M.; Osborne, L.; Padgett, G. B.; Ruden, B. E.; Rupe, J.; Schneider, R.; Schwartz, H.; Shaner, G.; Singh, S.; Stromberg, E.; Sweets, L.; Tenuta, A.; Vaiciunas, S.; Yang, X. B.; Young-Kelly, H.; Zidek, J. (2014-10-01)
    Existing crop monitoring programs determine the incidence and distribution of plant diseases and pathogens and assess the damage caused within a crop production region. These programs have traditionally used observed or ...
  • Cox, C. M.; Bowden, Robert L.; Fritz, A. K.; Dendy, S. P.; Heer, William F.; Garrett, Karen A. (2012-06-01)
    Because of differences in life histories between Puccinia triticina, a highly specialized, polycyclic, windborne pathogen with a shallow dispersal gradient, and Pyrenophora tritici-repentis, a residue-borne pathogen with ...
  • Landis, D. A.; Saidov, N.; Jaliov, A.; El Bouhssini, M.; Kennelly, Megan; Bahlai, C.; Landis, J. N.; Maredia, K.
    Wheat is an important food security crop in central Asia but frequently suffers severe damage and yield losses from insect pests, pathogens, and weeds. With funding from the United States Agency for International Development, ...
  • Liu, Wenxuan; Danilova, Tatiana V.; Rouse, Matthew N.; Bowden, Robert L.; Friebe, Bernd R.; Gill, Bikram S.; Pumphrey, Michael O. (2013-07-31)
    The emergence of the highly virulent Ug99 race complex of the stem rust fungus (Puccinia graminis Pers. f. sp. tritici Eriks. & Henn.) threatens wheat (Triticum aestivum L.) production worldwide. One of the effective genes ...
  • Wang, Y.; Drader, T.; Tiwari, Vijay K.; Dong, L. L.; Kumar, A.; Huo, N. X.; Ghavami, F.; Iqbal, M. J.; Lazo, G. R.; Leonard, J.; Gill, Bikram S.; Kianian, S. F.; Luo, M. C.; Gu, Y. Q.
  • Danilova, Tatiana V.; Friebe, Bernd R.; Gill, Bikram S. (2014-03-14)
    To transfer agronomically important genes from wild relatives to bread wheat (Triticum aestivum L., 2n = 6x = 42, AABBDD) by induced homoeologous recombination, it is important to know the chromosomal relationships of the ...
  • Rawat, Nidhi; Sehgal, Sunish K.; Joshi, Anupama; Rothe, Nolan; Wilson, Duane L.; McGraw, Nathan; Vadlani, Praveen V.; Li, Wanlong; Gill, Bikram S. (2013-03-20)
    Background: Triticum monococcum L., an A genome diploid einkorn wheat, was the first domesticated crop. As a diploid, it is attractive genetic model for the study of gene structure and function of wheat-specific traits. ...
  • Singh, Sukhwinder; Chahal, G. S.; Singh, P. K.; Gill, Bikram S. (2013-06-05)
    In the present study, a set of 63 accessions of Aegilops tauschii, the D-genome donor of bread wheat, was evaluated for marker-trait association using SSR markers and biotic and abiotic stress tolerance. Five accessions ...
  • Rutter, William B.; Salcedo, Andres; Akhunova, Alina; He, Fei; Wang, Shichen C.; Liang, Hanquan Q.; Bowden, Robert L.; Akhunov, Eduard
    Background: Two opposing evolutionary constraints exert pressure on plant pathogens: one to diversify virulence factors in order to evade plant defenses, and the other to retain virulence factors critical for maintaining ...
  • Gomez-Montano, L.; Jumpponen, Ari M.; Gonzales, M. A.; Cusicanqui, J.; Valdivia, C.; Motavalli, P.; Herman, Michael A.; Garrett, Karen A. (2013-01-10)
    This record provides supplemental material for this article: Gomez-Montano, L., A. Jumpponen, M. A. Gonzales, J. Cusicanqui, C. Valdivia, P. Motavalli, M. Herman, and K. A. Garrett. 2013. Do bacterial and fungal communities ...

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